Annotate CAbiNet results by gene overrepresentation analysis results.

`annotate_by_goa` takes a biclustering results such as outputted by `caclust` and annotates it with the gene overrepresentation analysis results (goa).

Conflicts between clusters that have the same highest ranking gene set are solved with the Hungarian/Munkres algorithm.

Usage

annotate_by_goa(obj, goa_res, alpha = 0.05)

# S4 method for caclust
annotate_by_goa(obj, goa_res, alpha = 0.05)

Arguments

obj: Biclustering results of type `caclust`
goa_res: List of goa results for each bicluster.
alpha: Adjusted p-value cutoff. Only results with padj < alpha will be used.

Value

Object of type `caclust` with annotated biclusters.